BioInformatics Division 2007

Chang, Tien-Hsien

  • Huai-Kuang Tsai*, Meng-Yuan Chou, Ching-Hua Shih, Grace Tzu-Wei Huang, Tien-Hsien Chang, Wen-Hsiung Li, 2007, “MYBS: a comprehensive web server for mining transcription factor binding sites in yeast”, Nucleic Acids Research, 35(S), W221-W226. (SCI)

Chuang, Trees-Juen

  • Lin YC, Diccianni MB, Kim Y, Lin HH, Lee CH, Lin RJ, Joo SH, Li J, Chuang TJ, Yang AS, Kuo HH, Tsai MD, Yu AL, 2007, “Human p16 , a novel transcriptional variant of p16INK4A, coexpresses with p16INK4A in cancer cells and inhibits cell-cycle progression”, Oncogene, 26(49), 7017-7027. (SCI)
  • Feng-Chi Chen and Trees-Juen Chuang*, 2007, “Different alternative splicing patterns are subject to opposite selection pressure for protein reading frame preservation.”, BMC Evolutionary Biology, 7(1):179. (SCI)
  • Feng-Chi Chen, Shu-Miaw Chaw, Yun-Huei Tzeng, Sheng-Shun Wang, and Trees-Juen Chuang*, 2007, “Opposite Evolutionary Effects between Different Alternative Splicing Patterns”, Molecular Biology and Evolution, 24, 1443-1446 (impact factor: 10.353; ranking: 14/290: BIOCHEMISTRY & MOLECULAR BIOLOGY). (SCI)
  • Yun-Huei Tzeng, Wen-Hsiung Li and Trees-Juen Chuang*, 2007, “Mathematical Properties of Some Measures of Evolutionary Distance”, Journal of Theoretical Biology, 245(4), 790-792. (SCI)
  • Feng-Chi Chen, Sheng-Shun Wang, Shu-Miaw Chaw, Yao-Ting Huang and Trees-Juen Chuang*, 2007, “PGAA: a plant genome annotation pipeline for rice gene and alternatively spliced variant identification with cross-species EST conservationfrom seven plant species”, Plant Physiology, 143(3), 1086-1095 (impact factor: 6.555; ranking: 8/195: PLANT SCIENCES). (SCI)
  • Feng-Chi Chen, Chueng-Jong Chen, Wen-Hsiung Li* and Trees-Juen Chuang*, 2007, “Human-specific insertions and deletions inferred from mammalian genome sequences”, Genome Research, 17(1), 16-22 (impact factor: 14.397; ranking: 3/160: BIOTECHNOLOGY & APPLIED MICROBIOLOGY). (SCI)
  • Feng-Chi, Chen; Chueng-Jong, Chen; Trees-Juen, Chuang*, 2007, “INDELSCAN: a web server for comparative identification of species-specific and non-species-specific insertion/deletion events”, Nucleic Acids Research, 35(Web Server issue), W633-8 (impact factor: 8.278; ranking: 27/290: BIOCHEMISTRY & MOLECULAR BIOLOGY). (SCI)